NTFS is considered pretty stable on Linux now. It should be safe to use indefinitely.
If you’re worried about the lack of Unix-style permissions and attributes in NTFS, then getting BTRFS or ext4 on Windows may be a good choice. Note that BTRFS is much more complicated than ext4, so ext4 may have better compatibility and lower risk of corruption. I used ext3 on Windows in 2007 and it was very reliable; ext4 today is very similar to ext3 from those days.
The absolute best compatibility would come from using a filesystem natively supported by both operating systems, developed without reverse engineering. That leaves only vfat (aka FAT32) and exfat. Both lack Unix-style permissions and attributes.
NTFS is considered pretty stable on Linux now. It should be safe to use indefinitely.
If you’re worried about the lack of Unix-style permissions and attributes in NTFS, then getting BTRFS or ext4 on Windows may be a good choice. Note that BTRFS is much more complicated than ext4, so ext4 may have better compatibility and lower risk of corruption. I used ext3 on Windows in 2007 and it was very reliable; ext4 today is very similar to ext3 from those days.
The absolute best compatibility would come from using a filesystem natively supported by both operating systems, developed without reverse engineering. That leaves only vfat (aka FAT32) and exfat. Both lack Unix-style permissions and attributes.